HCSGD entry for SF3A2
1. General information
| Official gene symbol | SF3A2 |
|---|---|
| Entrez ID | 8175 |
| Gene full name | splicing factor 3a, subunit 2, 66kDa |
| Other gene symbols | PRP11 PRPF11 SAP62 SF3a66 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000389 | MRNA 3'-splice site recognition | TAS | biological_process |
| GO:0000398 | MRNA splicing, via spliceosome | IC TAS | biological_process |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0005681 | Spliceosomal complex | IDA | cellular_component |
| GO:0006397 | MRNA processing | IMP | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0008380 | RNA splicing | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0030532 | Small nuclear ribonucleoprotein complex | TAS | cellular_component |
| GO:0071013 | Catalytic step 2 spliceosome | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1786164431 | 0.1470612667 | 0.8286980264 | 0.7410342649 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1679215057 |
| GSE13712_SHEAR | Up | 0.0564982763 |
| GSE13712_STATIC | Down | -0.2365415965 |
| GSE19018 | Up | 0.1438824859 |
| GSE19899_A1 | Down | -0.0507221463 |
| GSE19899_A2 | Up | 0.7061585437 |
| PubMed_21979375_A1 | Down | -0.4711526788 |
| PubMed_21979375_A2 | Up | 1.5277147626 |
| GSE35957 | Down | -0.6672584710 |
| GSE36640 | Down | -0.8131708213 |
| GSE54402 | Down | -0.1370585927 |
| GSE9593 | Down | -0.5981614065 |
| GSE43922 | Down | -0.0005739725 |
| GSE24585 | Down | -0.0937331480 |
| GSE37065 | Down | -0.3336386147 |
| GSE28863_A1 | Up | 0.0785592255 |
| GSE28863_A2 | Up | 0.1234039084 |
| GSE28863_A3 | Up | 0.4658612595 |
| GSE28863_A4 | Up | 0.1640221736 |
| GSE48662 | Up | 0.3856467417 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
