HCSGD entry for C6orf62
1. General information
| Official gene symbol | C6orf62 |
|---|---|
| Entrez ID | 81688 |
| Gene full name | chromosome 6 open reading frame 62 |
| Other gene symbols | Nbla00237 XTP12 dJ30M3.2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005622 | Intracellular | IDA | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4125807986 | 0.1118491433 | 0.9999902473 | 0.6407430374 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0255053326 |
| GSE13712_SHEAR | Up | 0.8377342733 |
| GSE13712_STATIC | Up | 0.4579011179 |
| GSE19018 | Down | -0.0171616627 |
| GSE19899_A1 | Down | -0.3295589834 |
| GSE19899_A2 | Down | -0.1900670335 |
| PubMed_21979375_A1 | Down | -0.0962086917 |
| PubMed_21979375_A2 | Down | -0.9351262085 |
| GSE35957 | Down | -0.0804267214 |
| GSE36640 | Down | -0.2029861694 |
| GSE54402 | Down | -0.0573641320 |
| GSE9593 | Down | -0.0353934348 |
| GSE43922 | Down | -0.4195166175 |
| GSE24585 | Up | 0.3106433426 |
| GSE37065 | Up | 0.1394986954 |
| GSE28863_A1 | Up | 0.3613973146 |
| GSE28863_A2 | Up | 0.4475290366 |
| GSE28863_A3 | Down | -0.7040363982 |
| GSE28863_A4 | Down | -0.2613588188 |
| GSE48662 | Down | -0.0496489527 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-192-5p | MIMAT0000222 | MIRT026421 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-1180-3p | MIMAT0005825 | MIRT035947 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037596 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048769 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052274 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
