HCSGD entry for TSC22D4
1. General information
| Official gene symbol | TSC22D4 |
|---|---|
| Entrez ID | 81628 |
| Gene full name | TSC22 domain family, member 4 |
| Other gene symbols | THG-1 THG1 TILZ2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006970 | Response to osmotic stress | IEA | biological_process |
| GO:0045892 | Negative regulation of transcription, DNA-templated | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1535353444 | 0.8994503742 | 0.7799638942 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1341820116 |
| GSE13712_SHEAR | Up | 0.4541842835 |
| GSE13712_STATIC | Down | -0.2196394712 |
| GSE19018 | Up | 0.0648558743 |
| GSE19899_A1 | Up | 0.1101517087 |
| GSE19899_A2 | Up | 0.4397523970 |
| PubMed_21979375_A1 | Up | 0.0507135474 |
| PubMed_21979375_A2 | Up | 0.6993550489 |
| GSE35957 | Down | -0.2640618552 |
| GSE36640 | Up | 0.1460080068 |
| GSE54402 | Up | 0.0885307100 |
| GSE9593 | Down | -0.0095423094 |
| GSE43922 | Up | 0.5583100763 |
| GSE24585 | Up | 0.1361673567 |
| GSE37065 | Down | -0.1613998379 |
| GSE28863_A1 | Down | -0.1294974120 |
| GSE28863_A2 | Down | -0.0002224222 |
| GSE28863_A3 | Up | 0.1572679249 |
| GSE28863_A4 | Down | -0.0856064253 |
| GSE48662 | Up | 0.2937745196 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT004100 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT004100 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025708 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-22-3p | MIMAT0000077 | MIRT030651 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-455-3p | MIMAT0004784 | MIRT037825 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
