HCSGD entry for NIPA2
1. General information
| Official gene symbol | NIPA2 |
|---|---|
| Entrez ID | 81614 |
| Gene full name | non imprinted in Prader-Willi/Angelman syndrome 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005769 | Early endosome | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0015095 | Magnesium ion transmembrane transporter activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0854215911 | 0.8687474222 | 0.6138613159 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5222585701 |
| GSE13712_SHEAR | Up | 0.0253195358 |
| GSE13712_STATIC | Up | 0.2103488697 |
| GSE19018 | Down | -0.4269642137 |
| GSE19899_A1 | Up | 0.0224892621 |
| GSE19899_A2 | Up | 0.5353663627 |
| PubMed_21979375_A1 | Up | 0.6238165437 |
| PubMed_21979375_A2 | Up | 0.4985705421 |
| GSE35957 | Down | -0.2348851979 |
| GSE36640 | Up | 0.2509241288 |
| GSE54402 | Up | 0.3573285560 |
| GSE9593 | Down | -0.1015241083 |
| GSE43922 | Up | 0.2097401741 |
| GSE24585 | Down | -0.1519938683 |
| GSE37065 | Up | 0.2394730289 |
| GSE28863_A1 | Up | 0.0701965452 |
| GSE28863_A2 | Up | 0.0984552024 |
| GSE28863_A3 | Down | -0.4460087103 |
| GSE28863_A4 | Up | 0.1656238740 |
| GSE48662 | Down | -0.2183717088 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-769-3p | MIMAT0003887 | MIRT039066 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040535 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-3615 | MIMAT0017994 | MIRT052855 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
