HCSGD entry for COIL
1. General information
| Official gene symbol | COIL |
|---|---|
| Entrez ID | 8161 |
| Gene full name | coilin |
| Other gene symbols | CLN80 p80-coilin |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001674 | Female germ cell nucleus | IEA | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | TAS | cellular_component |
| GO:0005654 | Nucleoplasm | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0008022 | Protein C-terminus binding | IPI | molecular_function |
| GO:0015030 | Cajal body | IDA | cellular_component |
| GO:0015036 | Disulfide oxidoreductase activity | IEA | molecular_function |
| GO:0042802 | Identical protein binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4548133658 | 0.3191272558 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1784303197 |
| GSE13712_SHEAR | Up | 0.5610588373 |
| GSE13712_STATIC | Up | 0.6283401091 |
| GSE19018 | Down | -0.1984043772 |
| GSE19899_A1 | Up | 0.0572893328 |
| GSE19899_A2 | Up | 0.0459081565 |
| PubMed_21979375_A1 | Up | 0.7268256826 |
| PubMed_21979375_A2 | Down | -0.1031353404 |
| GSE35957 | Down | -0.4449359165 |
| GSE36640 | Down | -0.5891051767 |
| GSE54402 | Up | 0.0616378802 |
| GSE9593 | Down | -0.3458971333 |
| GSE43922 | Down | -0.0498509210 |
| GSE24585 | Up | 0.1708860369 |
| GSE37065 | Up | 0.1108467153 |
| GSE28863_A1 | Up | 0.0110859165 |
| GSE28863_A2 | Up | 0.0201063109 |
| GSE28863_A3 | Down | -0.3531593501 |
| GSE28863_A4 | Up | 0.0310997522 |
| GSE48662 | Up | 0.0786968542 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT001376 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT001578 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027424 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-1285-3p | MIMAT0005876 | MIRT035906 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1229-3p | MIMAT0005584 | MIRT036262 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125a-5p | MIMAT0000443 | MIRT045705 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046486 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046608 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
