HCSGD entry for GDPD5
1. General information
| Official gene symbol | GDPD5 |
|---|---|
| Entrez ID | 81544 |
| Gene full name | glycerophosphodiester phosphodiesterase domain containing 5 |
| Other gene symbols | GDE2 PP1665 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0006071 | Glycerol metabolic process | IEA | biological_process |
| GO:0006629 | Lipid metabolic process | IEA | biological_process |
| GO:0008889 | Glycerophosphodiester phosphodiesterase activity | IEA | molecular_function |
| GO:0012505 | Endomembrane system | IEA | cellular_component |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0021522 | Spinal cord motor neuron differentiation | IEA | biological_process |
| GO:0021895 | Cerebral cortex neuron differentiation | IEA | biological_process |
| GO:0030426 | Growth cone | IEA | cellular_component |
| GO:0031175 | Neuron projection development | IEA | biological_process |
| GO:0045666 | Positive regulation of neuron differentiation | IEA | biological_process |
| GO:0045746 | Negative regulation of Notch signaling pathway | IEA | biological_process |
| GO:0048471 | Perinuclear region of cytoplasm | IEA | cellular_component |
| GO:0048505 | Regulation of timing of cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5100572091 | 0.2562952357 | 0.9999902473 | 0.9709806995 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0347478429 |
| GSE13712_SHEAR | Down | -1.2627544482 |
| GSE13712_STATIC | Down | -1.1170279520 |
| GSE19018 | Up | 0.2890144560 |
| GSE19899_A1 | Down | -0.0089446302 |
| GSE19899_A2 | Down | -0.2027943667 |
| PubMed_21979375_A1 | Down | -0.1312179366 |
| PubMed_21979375_A2 | Up | 0.2129643437 |
| GSE35957 | Up | 0.1999327543 |
| GSE36640 | Up | 0.2702558742 |
| GSE54402 | Down | -0.1881980607 |
| GSE9593 | Up | 0.0555526863 |
| GSE43922 | Up | 0.0567781834 |
| GSE24585 | Up | 0.0940138371 |
| GSE37065 | Down | -0.1640239019 |
| GSE28863_A1 | Up | 0.2411114582 |
| GSE28863_A2 | Down | -0.1209568950 |
| GSE28863_A3 | Down | -0.0737180485 |
| GSE28863_A4 | Up | 0.0351510999 |
| GSE48662 | Up | 0.2382811059 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049585 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT051947 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
