HCSGD entry for HM13
1. General information
| Official gene symbol | HM13 |
|---|---|
| Entrez ID | 81502 |
| Gene full name | histocompatibility (minor) 13 |
| Other gene symbols | H13 IMP1 IMPAS IMPAS-1 MSTP086 PSENL3 PSL3 SPP SPPL1 dJ324O17.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005783 | Endoplasmic reticulum | ISS | cellular_component |
| GO:0005791 | Rough endoplasmic reticulum | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0006509 | Membrane protein ectodomain proteolysis | IMP | biological_process |
| GO:0008233 | Peptidase activity | IDA | molecular_function |
| GO:0009986 | Cell surface | ISS | cellular_component |
| GO:0031293 | Membrane protein intracellular domain proteolysis | IMP | biological_process |
| GO:0033619 | Membrane protein proteolysis | IDA | biological_process |
| GO:0042500 | Aspartic endopeptidase activity, intramembrane cleaving | IMP | molecular_function |
| GO:0042803 | Protein homodimerization activity | IDA | molecular_function |
| GO:0071458 | Integral component of cytoplasmic side of endoplasmic reticulum membrane | IDA | cellular_component |
| GO:0071556 | Integral component of lumenal side of endoplasmic reticulum membrane | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1147952471 | 0.9464234528 | 0.6963645310 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0382251470 |
| GSE13712_SHEAR | Up | 0.0068783070 |
| GSE13712_STATIC | Up | 0.1150693433 |
| GSE19018 | Up | 0.0061464736 |
| GSE19899_A1 | Up | 0.2282228184 |
| GSE19899_A2 | Up | 0.5474841418 |
| PubMed_21979375_A1 | Up | 0.3043328279 |
| PubMed_21979375_A2 | Up | 0.2782035441 |
| GSE35957 | Down | -0.0773815468 |
| GSE36640 | Up | 0.5712921211 |
| GSE54402 | Up | 0.2749975959 |
| GSE9593 | Up | 0.1728906373 |
| GSE43922 | Up | 0.5343966176 |
| GSE24585 | Down | -0.1429143993 |
| GSE37065 | Up | 0.1911569030 |
| GSE28863_A1 | Up | 0.0403346831 |
| GSE28863_A2 | Down | -0.2069314452 |
| GSE28863_A3 | Down | -0.3112717798 |
| GSE28863_A4 | Down | -0.0284246619 |
| GSE48662 | Up | 0.1183805416 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-744-5p | MIMAT0004945 | MIRT037716 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041269 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051212 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
