HCSGD entry for PTDSS2
1. General information
| Official gene symbol | PTDSS2 |
|---|---|
| Entrez ID | 81490 |
| Gene full name | phosphatidylserine synthase 2 |
| Other gene symbols | PSS2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003882 | CDP-diacylglycerol-serine O-phosphatidyltransferase activity | IEA | molecular_function |
| GO:0005789 | Endoplasmic reticulum membrane | IEA ISS TAS | cellular_component |
| GO:0006644 | Phospholipid metabolic process | TAS | biological_process |
| GO:0006659 | Phosphatidylserine biosynthetic process | IEA TAS | biological_process |
| GO:0016020 | Membrane | ISS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046474 | Glycerophospholipid biosynthetic process | TAS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0112637438 | 0.9677836556 | 0.2682689531 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2403103452 |
| GSE13712_SHEAR | Down | -0.3171394590 |
| GSE13712_STATIC | Down | -0.1436935602 |
| GSE19018 | Up | 0.1491476548 |
| GSE19899_A1 | Up | 0.3866127591 |
| GSE19899_A2 | Up | 1.2931009435 |
| PubMed_21979375_A1 | Up | 1.3433097078 |
| PubMed_21979375_A2 | Up | 1.5634552687 |
| GSE35957 | Down | -0.1244086457 |
| GSE36640 | Up | 0.8271746582 |
| GSE54402 | Up | 0.1928211023 |
| GSE9593 | Up | 0.2638631816 |
| GSE43922 | Up | 0.6236288348 |
| GSE24585 | Down | -0.2854670148 |
| GSE37065 | Down | -0.2146998940 |
| GSE28863_A1 | Up | 0.1014096101 |
| GSE28863_A2 | Up | 0.1632123459 |
| GSE28863_A3 | Up | 0.2290715396 |
| GSE28863_A4 | Up | 0.0527340618 |
| GSE48662 | Up | 0.2802497379 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| Phosphatidyl serine | DB00144 | NUTR00048 |
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041217 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046833 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
