HCSGD entry for ARHGAP39
1. General information
| Official gene symbol | ARHGAP39 |
|---|---|
| Entrez ID | 80728 |
| Gene full name | Rho GTPase activating protein 39 |
| Other gene symbols | CrGAP Vilse |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0007264 | Small GTPase mediated signal transduction | TAS | biological_process |
| GO:0007411 | Axon guidance | TAS | biological_process |
| GO:0051056 | Regulation of small GTPase mediated signal transduction | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0648143194 | 0.9309216595 | 0.5490755391 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2338412084 |
| GSE13712_SHEAR | Down | -0.3581873918 |
| GSE13712_STATIC | Down | -0.1320719703 |
| GSE19018 | Down | -0.3740492803 |
| GSE19899_A1 | Down | -0.0423847150 |
| GSE19899_A2 | Up | 0.4514210873 |
| PubMed_21979375_A1 | Up | 0.3770704186 |
| PubMed_21979375_A2 | Up | 0.3362836535 |
| GSE35957 | Down | -0.0655951614 |
| GSE36640 | Up | 0.6756178614 |
| GSE54402 | Up | 0.5698489930 |
| GSE9593 | Up | 0.2912556832 |
| GSE43922 | Up | 0.1388140452 |
| GSE24585 | Down | -0.0864065465 |
| GSE37065 | Up | 0.0133450898 |
| GSE28863_A1 | Up | 0.0314834660 |
| GSE28863_A2 | Down | -0.0437080698 |
| GSE28863_A3 | Up | 0.4286439914 |
| GSE28863_A4 | Up | 0.1520184225 |
| GSE48662 | Up | 0.3886566876 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-186-5p | MIMAT0000456 | MIRT045251 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
