HCSGD entry for REEP4
1. General information
| Official gene symbol | REEP4 |
|---|---|
| Entrez ID | 80346 |
| Gene full name | receptor accessory protein 4 |
| Other gene symbols | C8orf20 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0005874 | Microtubule | IEA | cellular_component |
| GO:0006998 | Nuclear envelope organization | IMP | biological_process |
| GO:0007067 | Mitosis | IEA | biological_process |
| GO:0007084 | Mitotic nuclear envelope reassembly | IMP | biological_process |
| GO:0008017 | Microtubule binding | ISS | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8290385472 | 0.0606693477 | 0.9999902473 | 0.4637346980 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0955294898 |
| GSE13712_SHEAR | Down | -0.3392668008 |
| GSE13712_STATIC | Down | -0.2895027099 |
| GSE19018 | Up | 0.3715623563 |
| GSE19899_A1 | Down | -0.2207497895 |
| GSE19899_A2 | Down | -0.3267005737 |
| PubMed_21979375_A1 | Up | 1.2101753574 |
| PubMed_21979375_A2 | Down | -0.3782277224 |
| GSE35957 | Down | -1.0299750836 |
| GSE36640 | Down | -0.4326032950 |
| GSE54402 | Down | -0.0201144489 |
| GSE9593 | Down | -0.5091471963 |
| GSE43922 | Up | 0.1683115633 |
| GSE24585 | Down | -0.0915032245 |
| GSE37065 | Down | -0.3446462735 |
| GSE28863_A1 | Down | -0.3529077196 |
| GSE28863_A2 | Up | 0.3150137957 |
| GSE28863_A3 | Up | 0.1582708354 |
| GSE28863_A4 | Up | 0.1283889742 |
| GSE48662 | Down | -0.0547806297 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT032360 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040173 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041356 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
