HCSGD entry for RAB11FIP1
1. General information
| Official gene symbol | RAB11FIP1 |
|---|---|
| Entrez ID | 80223 |
| Gene full name | RAB11 family interacting protein 1 (class I) |
| Other gene symbols | NOEL1A RCP rab11-FIP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0030670 | Phagocytic vesicle membrane | IEA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
| GO:0055037 | Recycling endosome | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5513189582 | 0.0917973785 | 0.9999902473 | 0.5763833015 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1353097312 |
| GSE13712_SHEAR | Up | 0.0041852742 |
| GSE13712_STATIC | Down | -0.0303432613 |
| GSE19018 | Up | 0.0757247117 |
| GSE19899_A1 | Down | -0.5623023187 |
| GSE19899_A2 | Down | -0.3219175636 |
| PubMed_21979375_A1 | Down | -1.8042145626 |
| PubMed_21979375_A2 | Down | -0.1913638933 |
| GSE35957 | Down | -0.4383548361 |
| GSE36640 | Up | 0.3382637645 |
| GSE54402 | Down | -0.7117449824 |
| GSE9593 | Up | 0.3154982530 |
| GSE43922 | Down | -0.3170664139 |
| GSE24585 | Up | 0.6544023444 |
| GSE37065 | Down | -0.0435710236 |
| GSE28863_A1 | Down | -0.0566602049 |
| GSE28863_A2 | Up | 0.2084815334 |
| GSE28863_A3 | Up | 0.2878235040 |
| GSE28863_A4 | Up | 0.0174683917 |
| GSE48662 | Up | 0.3387623127 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-122-5p | MIMAT0000421 | MIRT003087 | Luciferase reporter assay//qRT-PCR | Functional MTI | 19296470 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT017073 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-101-3p | MIMAT0000099 | MIRT027273 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT027958 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028952 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028952 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-744-3p | MIMAT0004946 | MIRT037382 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-421 | MIMAT0003339 | MIRT039418 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040449 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042971 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043132 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
