HCSGD entry for FRAS1
1. General information
| Official gene symbol | FRAS1 |
|---|---|
| Entrez ID | 80144 |
| Gene full name | Fraser syndrome 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002009 | Morphogenesis of an epithelium | IEA | biological_process |
| GO:0005604 | Basement membrane | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007154 | Cell communication | IEA | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031012 | Extracellular matrix | ISS | cellular_component |
| GO:0043588 | Skin development | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0654037347 | 0.3326385966 | 0.5509572160 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1997931233 |
| GSE13712_SHEAR | Down | -0.0778651574 |
| GSE13712_STATIC | Down | -0.0083457584 |
| GSE19018 | Up | 0.1014965955 |
| GSE19899_A1 | Up | 0.1300042171 |
| GSE19899_A2 | Up | 0.1107626792 |
| PubMed_21979375_A1 | Up | 0.2828437455 |
| PubMed_21979375_A2 | Up | 0.2851579460 |
| GSE35957 | Down | -0.0718922820 |
| GSE36640 | Up | 0.1233582699 |
| GSE54402 | Up | 0.3132639672 |
| GSE9593 | Up | 0.0110520060 |
| GSE43922 | Up | 0.0137500677 |
| GSE24585 | Up | 0.2058950015 |
| GSE37065 | Down | -0.1977442093 |
| GSE28863_A1 | Up | 1.1077957981 |
| GSE28863_A2 | Up | 1.1952654520 |
| GSE28863_A3 | Down | -1.0942567394 |
| GSE28863_A4 | Down | -0.5361211654 |
| GSE48662 | Up | 0.1196212740 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022324 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
