HCSGD entry for THSD4
1. General information
| Official gene symbol | THSD4 |
|---|---|
| Entrez ID | 79875 |
| Gene full name | thrombospondin, type I, domain containing 4 |
| Other gene symbols | ADAMTSL-6 ADAMTSL6 FVSY9334 PRO34005 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001527 | Microfibril | IEA | cellular_component |
| GO:0004222 | Metalloendopeptidase activity | IEA | molecular_function |
| GO:0031012 | Extracellular matrix | IEA | cellular_component |
| GO:0048251 | Elastic fiber assembly | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2146746476 | 0.4171795031 | 0.8923644030 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1673831144 |
| GSE13712_SHEAR | Up | 0.3024059475 |
| GSE13712_STATIC | Up | 0.4917092936 |
| GSE19018 | Up | 0.0250452907 |
| GSE19899_A1 | Up | 0.0651274803 |
| GSE19899_A2 | Down | -0.0163538047 |
| PubMed_21979375_A1 | Down | -0.8529976459 |
| PubMed_21979375_A2 | Up | 0.1250189096 |
| GSE35957 | Up | 0.3311334687 |
| GSE36640 | Up | 0.1010273593 |
| GSE54402 | Down | -0.4318354455 |
| GSE9593 | Up | 0.1444838081 |
| GSE43922 | Down | -0.3843310582 |
| GSE24585 | Down | -0.1321334287 |
| GSE37065 | Up | 0.0212422209 |
| GSE28863_A1 | Up | 0.7014407913 |
| GSE28863_A2 | Up | 0.4673298158 |
| GSE28863_A3 | Down | -0.2048383539 |
| GSE28863_A4 | Up | 0.0860898910 |
| GSE48662 | Down | -0.1164896319 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018224 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
