HCSGD entry for RPAP2
1. General information
| Official gene symbol | RPAP2 |
|---|---|
| Entrez ID | 79871 |
| Gene full name | RNA polymerase II associated protein 2 |
| Other gene symbols | C1orf82 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0008420 | CTD phosphatase activity | IMP | molecular_function |
| GO:0009301 | SnRNA transcription | IMP | biological_process |
| GO:0016591 | DNA-directed RNA polymerase II, holoenzyme | IDA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0070940 | Dephosphorylation of RNA polymerase II C-terminal domain | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3022104213 | 0.8610407925 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1256565358 |
| GSE13712_SHEAR | Down | -0.1814251794 |
| GSE13712_STATIC | Up | 0.1856943191 |
| GSE19018 | Up | 0.1280276641 |
| GSE19899_A1 | Up | 0.1355106635 |
| GSE19899_A2 | Up | 0.2092873312 |
| PubMed_21979375_A1 | Down | -0.0679481766 |
| PubMed_21979375_A2 | Up | 0.3967849048 |
| GSE35957 | Down | -0.4372661592 |
| GSE36640 | Down | -0.0205314112 |
| GSE54402 | Up | 0.1474145172 |
| GSE9593 | Down | -0.0377868590 |
| GSE43922 | Up | 0.0313709817 |
| GSE24585 | Up | 0.1322508653 |
| GSE37065 | Up | 0.0923761604 |
| GSE28863_A1 | Up | 0.0709734686 |
| GSE28863_A2 | Up | 0.2739269252 |
| GSE28863_A3 | Up | 0.0539440396 |
| GSE28863_A4 | Down | -0.1983214177 |
| GSE48662 | Up | 0.1004071209 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024555 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026597 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-183-5p | MIMAT0000261 | MIRT047058 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
