HCSGD entry for FAM57A
1. General information
| Official gene symbol | FAM57A |
|---|---|
| Entrez ID | 79850 |
| Gene full name | family with sequence similarity 57, member A |
| Other gene symbols | CT120 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9820850728 | 0.0053678774 | 0.9999902473 | 0.1483513116 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.1555709794 |
| GSE13712_SHEAR | Down | -1.5759697248 |
| GSE13712_STATIC | Down | -0.1786239181 |
| GSE19018 | Up | 0.0967728022 |
| GSE19899_A1 | Down | -0.7356230524 |
| GSE19899_A2 | Down | -0.4889491455 |
| PubMed_21979375_A1 | Down | -0.1980299893 |
| PubMed_21979375_A2 | Up | 0.4885849337 |
| GSE35957 | Down | -0.7530411940 |
| GSE36640 | Down | -0.4774394914 |
| GSE54402 | Down | -0.1571965226 |
| GSE9593 | Up | 0.2975743767 |
| GSE43922 | Down | -0.1672450005 |
| GSE24585 | Down | -0.3935535915 |
| GSE37065 | Down | -0.1916511289 |
| GSE28863_A1 | Up | 0.0228095644 |
| GSE28863_A2 | Up | 0.0920078195 |
| GSE28863_A3 | Down | -0.5791470317 |
| GSE28863_A4 | Down | -0.1591129639 |
| GSE48662 | Down | -0.4209314150 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT003768 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-1 | MIMAT0000416 | MIRT003768 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT004913 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT004913 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027809 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045181 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048898 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052244 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | NA | hsa-miR-1 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
