HCSGD entry for AGMAT
1. General information
| Official gene symbol | AGMAT |
|---|---|
| Entrez ID | 79814 |
| Gene full name | agmatine ureohydrolase (agmatinase) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005739 | Mitochondrion | TAS | cellular_component |
| GO:0006595 | Polyamine metabolic process | TAS | biological_process |
| GO:0008295 | Spermidine biosynthetic process | IEA | biological_process |
| GO:0008783 | Agmatinase activity | IEA | molecular_function |
| GO:0033388 | Putrescine biosynthetic process from arginine | IEA | biological_process |
| GO:0034641 | Cellular nitrogen compound metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0097055 | Agmatine biosynthetic process | TAS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3281741271 | 0.4914407887 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0412368736 |
| GSE13712_SHEAR | Up | 0.0727786529 |
| GSE13712_STATIC | Up | 0.4158479606 |
| GSE19018 | Down | -0.3878758138 |
| GSE19899_A1 | Up | 0.1499928384 |
| GSE19899_A2 | Up | 0.8373355453 |
| PubMed_21979375_A1 | Up | 0.1041429753 |
| PubMed_21979375_A2 | Up | 0.5997837714 |
| GSE35957 | Down | -0.4586980116 |
| GSE36640 | Down | -0.2052308281 |
| GSE54402 | Up | 0.2212475937 |
| GSE9593 | Down | -0.4575664701 |
| GSE43922 | Up | 0.0827353394 |
| GSE24585 | Up | 0.1013231540 |
| GSE37065 | Down | -0.2055370594 |
| GSE28863_A1 | Down | -0.1472254302 |
| GSE28863_A2 | Down | -0.0260619931 |
| GSE28863_A3 | Up | 0.0617206516 |
| GSE28863_A4 | Up | 0.0888301959 |
| GSE48662 | Down | -0.4257725627 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT001392 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029705 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051619 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
