HCSGD entry for SHCBP1
1. General information
| Official gene symbol | SHCBP1 |
|---|---|
| Entrez ID | 79801 |
| Gene full name | SHC SH2-domain binding protein 1 |
| Other gene symbols | PAL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008543 | Fibroblast growth factor receptor signaling pathway | ISS | biological_process |
| GO:0042169 | SH2 domain binding | IEA | molecular_function |
| GO:2000177 | Regulation of neural precursor cell proliferation | ISS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9599046807 | 0.0000064625 | 0.9999902473 | 0.0069833333 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -3.7159011567 |
| GSE13712_SHEAR | Up | 0.0546919927 |
| GSE13712_STATIC | Down | -0.2834577169 |
| GSE19018 | Up | 0.3367877949 |
| GSE19899_A1 | Down | -3.7327510960 |
| GSE19899_A2 | Down | -4.2459867631 |
| PubMed_21979375_A1 | Down | -5.1798769784 |
| PubMed_21979375_A2 | Down | -6.8734799328 |
| GSE35957 | Down | -5.5144487010 |
| GSE36640 | Down | -3.8538508712 |
| GSE54402 | Down | -1.6094006921 |
| GSE9593 | Down | -2.0872857282 |
| GSE43922 | Down | -3.5583367389 |
| GSE24585 | Up | 0.1200871218 |
| GSE37065 | Down | -0.9159841788 |
| GSE28863_A1 | Down | -0.1034801596 |
| GSE28863_A2 | Down | -0.0374436720 |
| GSE28863_A3 | Up | 0.0700699938 |
| GSE28863_A4 | Up | 0.1135402296 |
| GSE48662 | Down | -2.3411626386 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016445 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-425-5p | MIMAT0003393 | MIRT016655 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-340-5p | MIMAT0004692 | MIRT019604 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-33a-5p | MIMAT0000091 | MIRT028215 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-32-5p | MIMAT0000090 | MIRT028313 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031291 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037132 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-455-3p | MIMAT0004784 | MIRT037830 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
