HCSGD entry for OGFOD2
1. General information
| Official gene symbol | OGFOD2 |
|---|---|
| Entrez ID | 79676 |
| Gene full name | 2-oxoglutarate and iron-dependent oxygenase domain containing 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005506 | Iron ion binding | IEA | molecular_function |
| GO:0016706 | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | IEA | molecular_function |
| GO:0031418 | L-ascorbic acid binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1759932411 | 0.9533829034 | 0.8236513509 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2129947372 |
| GSE13712_SHEAR | Down | -0.1529311726 |
| GSE13712_STATIC | Up | 0.0765573770 |
| GSE19018 | Up | 0.0622300807 |
| GSE19899_A1 | Up | 0.0169777661 |
| GSE19899_A2 | Up | 0.5832582100 |
| PubMed_21979375_A1 | Up | 0.8049617283 |
| PubMed_21979375_A2 | Up | 0.5452491544 |
| GSE35957 | Down | -0.2382583008 |
| GSE36640 | Up | 0.2837741514 |
| GSE54402 | Up | 0.1201674159 |
| GSE9593 | Down | -0.0584183715 |
| GSE43922 | Up | 0.0928912849 |
| GSE24585 | Down | -0.1056129708 |
| GSE37065 | Up | 0.0297916663 |
| GSE28863_A1 | Up | 0.1154264952 |
| GSE28863_A2 | Up | 0.0421080617 |
| GSE28863_A3 | Down | -0.2681023153 |
| GSE28863_A4 | Up | 0.0122831682 |
| GSE48662 | Up | 0.2514258320 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| Vitamin C | DB00126 | NUTR00001 | APRD00084 | EXPT00568 | DB09541 |
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022216 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
