HCSGD entry for PRRG4
1. General information
| Official gene symbol | PRRG4 |
|---|---|
| Entrez ID | 79056 |
| Gene full name | proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) |
| Other gene symbols | PRGP4 TMG4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0016021 | Integral component of membrane | NAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7513166635 | 0.2821251168 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1194133307 |
| GSE13712_SHEAR | Down | -0.1282478454 |
| GSE13712_STATIC | Up | 0.0583643575 |
| GSE19018 | Down | -0.0740436818 |
| GSE19899_A1 | Down | -0.0431221424 |
| GSE19899_A2 | Down | -0.0418103859 |
| PubMed_21979375_A1 | Down | -0.0406953880 |
| PubMed_21979375_A2 | Down | -0.1379192684 |
| GSE35957 | Down | -0.6474026723 |
| GSE36640 | Up | 0.3342376783 |
| GSE54402 | Up | 0.2421902428 |
| GSE9593 | Up | 0.0641513008 |
| GSE43922 | Up | 0.0156482577 |
| GSE24585 | Down | -0.3381754084 |
| GSE37065 | Up | 0.3862935149 |
| GSE28863_A1 | Down | -0.3740458749 |
| GSE28863_A2 | Down | -0.1947526468 |
| GSE28863_A3 | Up | 0.1053387457 |
| GSE28863_A4 | Up | 0.0719174515 |
| GSE48662 | Down | -0.1624392016 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-192-5p | MIMAT0000222 | MIRT026866 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-21-5p | MIMAT0000076 | NA | hsa-miR-21 | 17991735 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
