HCSGD entry for SLC30A2
1. General information
| Official gene symbol | SLC30A2 |
|---|---|
| Entrez ID | 7780 |
| Gene full name | solute carrier family 30 (zinc transporter), member 2 |
| Other gene symbols | PP12488 TNZD ZNT2 ZnT-2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005765 | Lysosomal membrane | IDA | cellular_component |
| GO:0005770 | Late endosome | IDA | cellular_component |
| GO:0006829 | Zinc ion transport | IEA | biological_process |
| GO:0008324 | Cation transmembrane transporter activity | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
| GO:0061090 | Positive regulation of sequestering of zinc ion | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8581379963 | 0.6127838874 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0745503520 |
| GSE13712_SHEAR | Up | 0.0329956973 |
| GSE13712_STATIC | Down | -0.1143849415 |
| GSE19018 | Down | -0.0934733126 |
| GSE19899_A1 | Down | -0.0972051666 |
| GSE19899_A2 | Down | -0.0438140942 |
| PubMed_21979375_A1 | Up | 0.0215880394 |
| PubMed_21979375_A2 | Down | -0.1895044027 |
| GSE35957 | Up | 0.0250530544 |
| GSE36640 | Down | -0.0323780766 |
| GSE54402 | Down | -0.0184590575 |
| GSE9593 | Up | 0.0916106238 |
| GSE43922 | Up | 0.0156837924 |
| GSE24585 | Up | 0.2448094953 |
| GSE37065 | Down | -0.1530945035 |
| GSE28863_A1 | Down | -0.0500596715 |
| GSE28863_A2 | Up | 0.0093231713 |
| GSE28863_A3 | Up | 0.1628234218 |
| GSE28863_A4 | Up | 0.1932774416 |
| GSE48662 | Up | 0.0278763071 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017045 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
