HCSGD entry for ZNF175
1. General information
| Official gene symbol | ZNF175 |
|---|---|
| Entrez ID | 7728 |
| Gene full name | zinc finger protein 175 |
| Other gene symbols | OTK18 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | TAS | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0045111 | Intermediate filament cytoskeleton | IDA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0051607 | Defense response to virus | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0343564568 | 0.5952112990 | 0.4258649741 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.6212604378 |
| GSE13712_SHEAR | Up | 0.5382974601 |
| GSE13712_STATIC | Up | 0.2522684169 |
| GSE19018 | Up | 0.0429256474 |
| GSE19899_A1 | Up | 0.1013479907 |
| GSE19899_A2 | Up | 0.3237945016 |
| PubMed_21979375_A1 | Up | 0.3352662064 |
| PubMed_21979375_A2 | Up | 0.4028418184 |
| GSE35957 | Up | 0.2275256028 |
| GSE36640 | Up | 0.0885162376 |
| GSE54402 | Up | 0.9748655521 |
| GSE9593 | Down | -0.1287608651 |
| GSE43922 | Up | 0.1444987373 |
| GSE24585 | Down | -0.2867523649 |
| GSE37065 | Up | 0.4319716230 |
| GSE28863_A1 | Down | -0.0083404653 |
| GSE28863_A2 | Up | 0.2699667085 |
| GSE28863_A3 | Down | -1.1614249849 |
| GSE28863_A4 | Up | 0.0947257090 |
| GSE48662 | Down | -0.5809076376 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-197-3p | MIMAT0000227 | MIRT004203 | Microarray | Functional MTI (Weak) | 16822819 |
| hsa-miR-374b-5p | MIMAT0004955 | MIRT016079 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT017746 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
