HCSGD entry for ZNF84
1. General information
| Official gene symbol | ZNF84 |
|---|---|
| Entrez ID | 7637 |
| Gene full name | zinc finger protein 84 |
| Other gene symbols | HPF2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | NAS | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0008270 | Zinc ion binding | NAS | molecular_function |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8988066335 | 0.0509834999 | 0.9999902473 | 0.4245291680 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0784847880 |
| GSE13712_SHEAR | Down | -0.1842415800 |
| GSE13712_STATIC | Down | -0.1045165016 |
| GSE19018 | Down | -0.5218807966 |
| GSE19899_A1 | Down | -0.1968293065 |
| GSE19899_A2 | Down | -0.5568525711 |
| PubMed_21979375_A1 | Down | -0.1659839073 |
| PubMed_21979375_A2 | Down | -0.4441287834 |
| GSE35957 | Down | -0.1351036855 |
| GSE36640 | Down | -0.2102466702 |
| GSE54402 | Down | -0.3030377391 |
| GSE9593 | Down | -0.1790925447 |
| GSE43922 | Up | 0.1176400201 |
| GSE24585 | Up | 0.1066816669 |
| GSE37065 | Up | 0.0930945333 |
| GSE28863_A1 | Up | 0.3569920218 |
| GSE28863_A2 | Up | 0.4441474067 |
| GSE28863_A3 | Down | -0.7702316334 |
| GSE28863_A4 | Down | -0.0918796632 |
| GSE48662 | Down | -0.2975635933 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028911 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049366 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
