HCSGD entry for ZNF18
1. General information
| Official gene symbol | ZNF18 |
|---|---|
| Entrez ID | 7566 |
| Gene full name | zinc finger protein 18 |
| Other gene symbols | HDSG1 KOX11 ZKSCAN6 ZNF535 ZSCAN38 Zfp535 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000981 | Sequence-specific DNA binding RNA polymerase II transcription factor activity | IBA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IBA IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006357 | Regulation of transcription from RNA polymerase II promoter | IBA | biological_process |
| GO:0006366 | Transcription from RNA polymerase II promoter | IBA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8054859200 | 0.1356805327 | 0.9999902473 | 0.7104132286 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1619608859 |
| GSE13712_SHEAR | Down | -0.3575140309 |
| GSE13712_STATIC | Up | 0.0082442687 |
| GSE19018 | Up | 0.1079884920 |
| GSE19899_A1 | Down | -0.0808813021 |
| GSE19899_A2 | Down | -0.0162260791 |
| PubMed_21979375_A1 | Down | -0.0881493125 |
| PubMed_21979375_A2 | Up | 0.3721320650 |
| GSE35957 | Down | -0.2853096427 |
| GSE36640 | Up | 0.9644802934 |
| GSE54402 | Down | -0.5565225732 |
| GSE9593 | Down | -0.0332839801 |
| GSE43922 | Up | 0.0691597779 |
| GSE24585 | Down | -0.0270247223 |
| GSE37065 | Down | -0.0213975280 |
| GSE28863_A1 | Down | -0.1351670002 |
| GSE28863_A2 | Down | -0.4127710629 |
| GSE28863_A3 | Down | -0.3514014040 |
| GSE28863_A4 | Down | -0.1383513185 |
| GSE48662 | Down | -0.2277408150 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
