HCSGD entry for ZNF3
1. General information
| Official gene symbol | ZNF3 |
|---|---|
| Entrez ID | 7551 |
| Gene full name | zinc finger protein 3 |
| Other gene symbols | A8-51 HF.12 KOX25 PP838 Zfp113 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | NAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005634 | Nucleus | IC IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0008270 | Zinc ion binding | NAS | molecular_function |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0042802 | Identical protein binding | IPI | molecular_function |
| GO:0045321 | Leukocyte activation | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9856940162 | 0.1028981346 | 0.9999902473 | 0.6145636034 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1003383930 |
| GSE13712_SHEAR | Down | -0.0289354075 |
| GSE13712_STATIC | Up | 0.0534145193 |
| GSE19018 | Down | -0.2034014264 |
| GSE19899_A1 | Down | -0.1198387000 |
| GSE19899_A2 | Down | -0.2657130621 |
| PubMed_21979375_A1 | Down | -0.4668841073 |
| PubMed_21979375_A2 | Down | -0.1628514335 |
| GSE35957 | Down | -0.2037577206 |
| GSE36640 | Down | -0.1464773676 |
| GSE54402 | Down | -0.0931246042 |
| GSE9593 | Down | -0.3012091040 |
| GSE43922 | Down | -0.0661258117 |
| GSE24585 | Up | 0.0682583022 |
| GSE37065 | Down | -0.0766446193 |
| GSE28863_A1 | Down | -0.0657407610 |
| GSE28863_A2 | Up | 0.0253748689 |
| GSE28863_A3 | Down | -0.5305544379 |
| GSE28863_A4 | Down | -0.2253510142 |
| GSE48662 | Up | 0.0473734230 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041485 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052240 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
