HCSGD entry for UBP1
1. General information
| Official gene symbol | UBP1 |
|---|---|
| Entrez ID | 7342 |
| Gene full name | upstream binding protein 1 (LBP-1a) |
| Other gene symbols | LBP-1B LBP-1a LBP1A LBP1B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001525 | Angiogenesis | IEA | biological_process |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | TAS | molecular_function |
| GO:0003714 | Transcription corepressor activity | TAS | molecular_function |
| GO:0005634 | Nucleus | TAS | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006357 | Regulation of transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0019079 | Viral genome replication | TAS | biological_process |
| GO:0045892 | Negative regulation of transcription, DNA-templated | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9259995897 | 0.1682109646 | 0.9999902473 | 0.7930220591 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1339939168 |
| GSE13712_SHEAR | Up | 0.1251622192 |
| GSE13712_STATIC | Down | -0.1345984633 |
| GSE19018 | Down | -0.5476143704 |
| GSE19899_A1 | Down | -0.1269023413 |
| GSE19899_A2 | Up | 0.2798405060 |
| PubMed_21979375_A1 | Down | -0.1590825314 |
| PubMed_21979375_A2 | Up | 0.1260392607 |
| GSE35957 | Down | -0.1244981212 |
| GSE36640 | Down | -0.1664908727 |
| GSE54402 | Up | 0.1179718730 |
| GSE9593 | Down | -0.7322919414 |
| GSE43922 | Down | -0.0324772728 |
| GSE24585 | Up | 0.0153370577 |
| GSE37065 | Up | 0.1638639940 |
| GSE28863_A1 | Down | -0.0466390739 |
| GSE28863_A2 | Down | -0.0796225481 |
| GSE28863_A3 | Up | 0.0448231550 |
| GSE28863_A4 | Up | 0.0726216236 |
| GSE48662 | Down | -0.2563548426 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-183-5p | MIMAT0000261 | MIRT025006 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025583 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-182-5p | MIMAT0000259 | MIRT047198 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
