HCSGD entry for TSPYL1
1. General information
| Official gene symbol | TSPYL1 |
|---|---|
| Entrez ID | 7259 |
| Gene full name | TSPY-like 1 |
| Other gene symbols | TSPYL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006334 | Nucleosome assembly | IEA | biological_process |
| GO:0008150 | Biological_process | ND | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0865972038 | 0.8923097299 | 0.6173686349 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0152143018 |
| GSE13712_SHEAR | Up | 0.4880202691 |
| GSE13712_STATIC | Up | 0.2772765016 |
| GSE19018 | Up | 0.0102541271 |
| GSE19899_A1 | Up | 0.1706949360 |
| GSE19899_A2 | Up | 0.3514173553 |
| PubMed_21979375_A1 | Up | 0.1369040960 |
| PubMed_21979375_A2 | Up | 0.3264760261 |
| GSE35957 | Up | 0.5521741752 |
| GSE36640 | Up | 0.6481371520 |
| GSE54402 | Up | 0.2111308721 |
| GSE9593 | Up | 0.0200184387 |
| GSE43922 | Up | 0.2274152729 |
| GSE24585 | Down | -0.3339495437 |
| GSE37065 | Up | 0.2639894488 |
| GSE28863_A1 | Down | -0.1334151442 |
| GSE28863_A2 | Up | 0.2056977522 |
| GSE28863_A3 | Down | -0.3312889973 |
| GSE28863_A4 | Down | -0.2077174671 |
| GSE48662 | Down | -0.0174278979 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-197-3p | MIMAT0000227 | MIRT004190 | Microarray | Functional MTI (Weak) | 16822819 |
| hsa-miR-320c | MIMAT0005793 | MIRT036165 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT036870 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040692 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1260b | MIMAT0015041 | MIRT052748 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
