HCSGD entry for TNNC2
1. General information
| Official gene symbol | TNNC2 |
|---|---|
| Entrez ID | 7125 |
| Gene full name | troponin C type 2 (fast) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003009 | Skeletal muscle contraction | IDA | biological_process |
| GO:0003779 | Actin binding | IDA | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005861 | Troponin complex | IDA | cellular_component |
| GO:0006937 | Regulation of muscle contraction | TAS | biological_process |
| GO:0030049 | Muscle filament sliding | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5802240492 | 0.7726935641 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0602845671 |
| GSE13712_SHEAR | Up | 0.1024201488 |
| GSE13712_STATIC | Up | 0.0771736802 |
| GSE19018 | Up | 0.1091402489 |
| GSE19899_A1 | Down | -0.0296675202 |
| GSE19899_A2 | Up | 0.1342789608 |
| PubMed_21979375_A1 | Up | 0.2786878148 |
| PubMed_21979375_A2 | Down | -0.2547720851 |
| GSE35957 | Up | 0.0456404183 |
| GSE36640 | Up | 0.1646666569 |
| GSE54402 | Down | -0.0438007756 |
| GSE9593 | Down | -0.0281996929 |
| GSE43922 | Up | 0.0496057241 |
| GSE24585 | Down | -0.0139868827 |
| GSE37065 | Down | -0.2263718767 |
| GSE28863_A1 | Down | -0.0765451389 |
| GSE28863_A2 | Down | -0.0337386386 |
| GSE28863_A3 | Up | 0.1123020266 |
| GSE28863_A4 | Down | -0.0197543519 |
| GSE48662 | Up | 0.5351611556 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
