HCSGD entry for TMPO
1. General information
| Official gene symbol | TMPO |
|---|---|
| Entrez ID | 7112 |
| Gene full name | thymopoietin |
| Other gene symbols | CMD1T LAP2 LEMD4 PRO0868 TP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000785 | Chromatin | IDA | cellular_component |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005521 | Lamin binding | TAS | molecular_function |
| GO:0005634 | Nucleus | IDA TAS | cellular_component |
| GO:0005635 | Nuclear envelope | TAS | cellular_component |
| GO:0005637 | Nuclear inner membrane | IEA | cellular_component |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9929507731 | 0.0001345580 | 0.9999902473 | 0.0203545977 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.7617936322 |
| GSE13712_SHEAR | Up | 0.0092071897 |
| GSE13712_STATIC | Down | -0.2553468485 |
| GSE19018 | Down | -0.6328371537 |
| GSE19899_A1 | Down | -0.8566764440 |
| GSE19899_A2 | Down | -2.5061284933 |
| PubMed_21979375_A1 | Down | -1.5992993329 |
| PubMed_21979375_A2 | Down | -2.8278415918 |
| GSE35957 | Down | -2.0472496165 |
| GSE36640 | Down | -3.9415204287 |
| GSE54402 | Down | -0.2610404295 |
| GSE9593 | Down | -1.0942655821 |
| GSE43922 | Down | -0.7416922677 |
| GSE24585 | Up | 0.1278736502 |
| GSE37065 | Down | -0.6081084485 |
| GSE28863_A1 | Down | -0.1179261637 |
| GSE28863_A2 | Down | -0.2418246850 |
| GSE28863_A3 | Down | -0.6603785855 |
| GSE28863_A4 | Up | 0.4518803266 |
| GSE48662 | Down | -0.5319221221 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024489 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026410 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-1301-3p | MIMAT0005797 | MIRT035992 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1296-5p | MIMAT0005794 | MIRT036084 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039662 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044336 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044781 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-96-5p | MIMAT0000095 | MIRT048728 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
