HCSGD entry for TCF19
1. General information
| Official gene symbol | TCF19 |
|---|---|
| Entrez ID | 6941 |
| Gene full name | transcription factor 19 |
| Other gene symbols | SC1 SC1-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | TAS | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006357 | Regulation of transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0008283 | Cell proliferation | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9787718324 | 0.0000368527 | 0.9999902473 | 0.0107777778 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3552039900 |
| GSE13712_SHEAR | Up | 0.2192173709 |
| GSE13712_STATIC | Down | -0.2827352078 |
| GSE19018 | Up | 0.0363156066 |
| GSE19899_A1 | Down | -0.7578493423 |
| GSE19899_A2 | Down | -4.7252406519 |
| PubMed_21979375_A1 | Down | -3.7269776526 |
| PubMed_21979375_A2 | Down | -4.7301320849 |
| GSE35957 | Down | -2.6121055170 |
| GSE36640 | Down | -3.7906918362 |
| GSE54402 | Down | -0.6554660071 |
| GSE9593 | Down | -1.8299533701 |
| GSE43922 | Down | -1.3224160436 |
| GSE24585 | Down | -0.0788363138 |
| GSE37065 | Down | -0.8501388594 |
| GSE28863_A1 | Down | -0.3475856008 |
| GSE28863_A2 | Up | 1.0389520818 |
| GSE28863_A3 | Down | -0.4315267010 |
| GSE28863_A4 | Down | -0.1850665632 |
| GSE48662 | Down | -0.8872781843 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-484 | MIMAT0002174 | MIRT041802 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-107 | MIMAT0000104 | MIRT048303 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
