HCSGD entry for SSBP1
1. General information
| Official gene symbol | SSBP1 |
|---|---|
| Entrez ID | 6742 |
| Gene full name | single-stranded DNA binding protein 1, mitochondrial |
| Other gene symbols | Mt-SSB SOSS-B1 SSBP mtSSB |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003682 | Chromatin binding | IDA | molecular_function |
| GO:0003697 | Single-stranded DNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005739 | Mitochondrion | IDA IEA | cellular_component |
| GO:0006260 | DNA replication | IEA | biological_process |
| GO:0042645 | Mitochondrial nucleoid | IDA | cellular_component |
| GO:0051096 | Positive regulation of helicase activity | IDA | biological_process |
| GO:0070584 | Mitochondrion morphogenesis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9087071540 | 0.2423838532 | 0.9999902473 | 0.9483849264 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0182458719 |
| GSE13712_SHEAR | Down | -0.0314432206 |
| GSE13712_STATIC | Up | 0.0410478821 |
| GSE19018 | Down | -0.1993633086 |
| GSE19899_A1 | Up | 0.0585364533 |
| GSE19899_A2 | Down | -0.0723173421 |
| PubMed_21979375_A1 | Up | 0.4561325484 |
| PubMed_21979375_A2 | Up | 0.4175791633 |
| GSE35957 | Down | -0.3576010649 |
| GSE36640 | Down | -0.4948959507 |
| GSE54402 | Up | 0.0283893012 |
| GSE9593 | Down | -0.1655922630 |
| GSE43922 | Up | 0.0007078402 |
| GSE24585 | Down | -0.5028537798 |
| GSE37065 | Down | -0.1171803972 |
| GSE28863_A1 | Up | 0.1646489197 |
| GSE28863_A2 | Up | 0.2200840866 |
| GSE28863_A3 | Down | -0.0592296750 |
| GSE28863_A4 | Down | -0.1051175053 |
| GSE48662 | Down | -0.1774674374 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
