HCSGD entry for SNAPC2
1. General information
| Official gene symbol | SNAPC2 |
|---|---|
| Entrez ID | 6618 |
| Gene full name | small nuclear RNA activating complex, polypeptide 2, 45kDa |
| Other gene symbols | PTFDELTA SNAP45 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | TAS | molecular_function |
| GO:0005634 | Nucleus | TAS | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0006383 | Transcription from RNA polymerase III promoter | TAS | biological_process |
| GO:0009301 | SnRNA transcription | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1614254018 | 0.5882589263 | 0.7953721453 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4220915688 |
| GSE13712_SHEAR | Down | -0.2042558748 |
| GSE13712_STATIC | Up | 0.3903841106 |
| GSE19018 | Down | -0.0617851918 |
| GSE19899_A1 | Down | -0.2375793451 |
| GSE19899_A2 | Up | 0.6325651169 |
| PubMed_21979375_A1 | Up | 0.4040873483 |
| PubMed_21979375_A2 | Down | -0.2382891371 |
| GSE35957 | Down | -0.2339253665 |
| GSE36640 | Up | 0.0710198359 |
| GSE54402 | Up | 0.2876859518 |
| GSE9593 | Up | 0.0228651566 |
| GSE43922 | Up | 0.1441682998 |
| GSE24585 | Up | 0.6139278515 |
| GSE37065 | Down | -0.1519163554 |
| GSE28863_A1 | Up | 0.1824322222 |
| GSE28863_A2 | Down | -0.2539472631 |
| GSE28863_A3 | Down | -0.2163951766 |
| GSE28863_A4 | Up | 0.0295568268 |
| GSE48662 | Down | -0.0828158455 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
