HCSGD entry for ZSCAN18
1. General information
| Official gene symbol | ZSCAN18 |
|---|---|
| Entrez ID | 65982 |
| Gene full name | zinc finger and SCAN domain containing 18 |
| Other gene symbols | ZNF447 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000981 | Sequence-specific DNA binding RNA polymerase II transcription factor activity | IBA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IBA IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006357 | Regulation of transcription from RNA polymerase II promoter | IBA | biological_process |
| GO:0006366 | Transcription from RNA polymerase II promoter | IBA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1428482542 | 0.3260720907 | 0.7572827593 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1889993131 |
| GSE13712_SHEAR | Down | -2.0753639604 |
| GSE13712_STATIC | Down | -1.5357645912 |
| GSE19018 | Up | 0.0349848995 |
| GSE19899_A1 | Up | 0.0241145205 |
| GSE19899_A2 | Up | 0.5934066016 |
| PubMed_21979375_A1 | Up | 0.5994365795 |
| PubMed_21979375_A2 | Up | 0.7347614316 |
| GSE35957 | Down | -0.5863431338 |
| GSE36640 | Up | 0.6450406903 |
| GSE54402 | Down | -0.0069035099 |
| GSE9593 | Up | 0.1019964808 |
| GSE43922 | Up | 0.0903669272 |
| GSE24585 | Down | -0.0287540078 |
| GSE37065 | Up | 0.0260187040 |
| GSE28863_A1 | Down | -0.0087100106 |
| GSE28863_A2 | Down | -0.0832772482 |
| GSE28863_A3 | Up | 0.1732535852 |
| GSE28863_A4 | Up | 0.0751699932 |
| GSE48662 | Up | 0.2631805170 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-744-5p | MIMAT0004945 | MIRT037499 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040721 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
