HCSGD entry for SLC18A3
1. General information
| Official gene symbol | SLC18A3 |
|---|---|
| Entrez ID | 6572 |
| Gene full name | solute carrier family 18 (vesicular acetylcholine), member 3 |
| Other gene symbols | VACHT |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005277 | Acetylcholine transmembrane transporter activity | TAS | molecular_function |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0007268 | Synaptic transmission | TAS | biological_process |
| GO:0007269 | Neurotransmitter secretion | TAS | biological_process |
| GO:0015870 | Acetylcholine transport | TAS | biological_process |
| GO:0016020 | Membrane | TAS | cellular_component |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0060201 | Clathrin-sculpted acetylcholine transport vesicle membrane | TAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5661699517 | 0.7244651077 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2414638784 |
| GSE13712_SHEAR | Up | 0.2828809094 |
| GSE13712_STATIC | Up | 0.0896621440 |
| GSE19018 | Up | 0.0964835568 |
| GSE19899_A1 | Up | 0.0517992989 |
| GSE19899_A2 | Up | 0.0055441556 |
| PubMed_21979375_A1 | Up | 0.1125120993 |
| PubMed_21979375_A2 | Down | -0.1937456672 |
| GSE35957 | Up | 0.1734805051 |
| GSE36640 | Up | 0.1211518979 |
| GSE54402 | Up | 0.0389148091 |
| GSE9593 | Up | 0.0627338325 |
| GSE43922 | Up | 0.2564199640 |
| GSE24585 | Down | -0.1004624062 |
| GSE37065 | Down | -0.0246231279 |
| GSE28863_A1 | Down | -0.2302697108 |
| GSE28863_A2 | Down | -0.0522013249 |
| GSE28863_A3 | Up | 0.2067206862 |
| GSE28863_A4 | Down | -0.0181319443 |
| GSE48662 | Up | 0.1085324619 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
