HCSGD entry for SLC7A4
1. General information
| Official gene symbol | SLC7A4 |
|---|---|
| Entrez ID | 6545 |
| Gene full name | solute carrier family 7 (orphan transporter), member 4 |
| Other gene symbols | CAT-4 CAT4 HCAT3 VH |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0006520 | Cellular amino acid metabolic process | TAS | biological_process |
| GO:0006810 | Transport | TAS | biological_process |
| GO:0015171 | Amino acid transmembrane transporter activity | IEA | molecular_function |
| GO:0015174 | Basic amino acid transmembrane transporter activity | TAS | molecular_function |
| GO:0015802 | Basic amino acid transport | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5751125755 | 0.8003748528 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0237402403 |
| GSE13712_SHEAR | Up | 0.0363342646 |
| GSE13712_STATIC | Up | 0.0149106185 |
| GSE19018 | Down | -0.0244094523 |
| GSE19899_A1 | Down | -0.0138614046 |
| GSE19899_A2 | Up | 0.0987749908 |
| PubMed_21979375_A1 | Down | -0.0110369588 |
| PubMed_21979375_A2 | Down | -0.1815095810 |
| GSE35957 | Up | 0.1395571867 |
| GSE36640 | Up | 0.0757418587 |
| GSE54402 | Down | -0.1544432375 |
| GSE9593 | Up | 0.1120354960 |
| GSE43922 | Up | 0.0242729936 |
| GSE24585 | Down | -0.2591176071 |
| GSE37065 | Up | 0.0880080165 |
| GSE28863_A1 | Down | -0.0650315287 |
| GSE28863_A2 | Up | 0.0574978773 |
| GSE28863_A3 | Up | 0.1338311922 |
| GSE28863_A4 | Up | 0.3651767889 |
| GSE48662 | Up | 0.1883951938 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| L-Lysine | DB00123 | NUTR00037 | DB11101 |
| L-Arginine | DB00125 | NUTR00014 |
| L-Ornithine | DB00129 | NUTR00043 |
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
