HCSGD entry for SLC13A3


1. General information

Official gene symbolSLC13A3
Entrez ID64849
Gene full namesolute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
Other gene symbolsNADC3 SDCT2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005215Transporter activityIEAmolecular_function
GO:0005886Plasma membraneTAScellular_component
GO:0006814Sodium ion transportIEAbiological_process
GO:0015362High affinity sodium:dicarboxylate symporter activityIEAmolecular_function
GO:0016020MembraneIEAcellular_component
GO:0016021Integral component of membraneIEAcellular_component
GO:0055085Transmembrane transportIEA TASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.46716167320.93776655900.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0514044221
GSE13712_SHEARDown-0.0235509241
GSE13712_STATICUp0.0163803375
GSE19018Up0.2228188713
GSE19899_A1Up0.1384517170
GSE19899_A2Up0.2416533691
PubMed_21979375_A1Up0.5294041858
PubMed_21979375_A2Up0.0193301545
GSE35957Up0.0356045193
GSE36640Up0.0969662163
GSE54402Down-0.0022539005
GSE9593Up0.0180865483
GSE43922Up0.0288846473
GSE24585Down-0.0241905833
GSE37065Down-0.0298278587
GSE28863_A1Up0.1930327025
GSE28863_A2Down-0.0685313864
GSE28863_A3Up0.1147597800
GSE28863_A4Down-0.0257032896
GSE48662Up0.0773205362

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: 3 abstracts the gene occurs.


PubMed ID of the article

Sentenece the gene occurs

25384549NaDC3 Induces Premature Cellular Senescence by Promoting Transport of Krebs Cycle Intermediates, Increasing NADH, and Exacerbating Oxidative Damage
25384549High-affinity sodium-dependent dicarboxylate cotransporter 3 (NaDC3) is a key metabolism-regulating membrane protein responsible for transport of Krebs cycle intermediates
25384549NaDC3 is upregulated as organs age, but knowledge regarding the underlying mechanisms by which NaDC3 modulates mammalian aging is limited
25384549In this study, we showed that NaDC3 overexpression accelerated cellular senescence in young human diploid cells (MRC-5 and WI-38) and primary renal tubular cells, leading to cell cycle arrest in G1 phase and increased expression of senescent biomarkers, senescence-associated beta-galactosidase and p16
25384549Stressful premature senescent phenotypes induced by NaDC3 were markedly ameliorated via treatment with the antioxidants Tiron and Tempol
25384549High expression of NaDC3 caused a prominent increase in intracellular levels of Krebs cycle intermediates and NADH
25384549Exogenous NADH and NAD(+) may aggravate and attenuate the aging phenotypes induced by NaDC3, respectively
25384549These results suggest that NaDC3 can induce premature cellular senescence by promoting the transport of Krebs cycle intermediates, increasing generation of NADH and reactive oxygen species and leading to oxidative damage
25384549Our results clarify the aging signaling pathway regulated by NaDC3
20813124High-affinity Na(+)-dependent dicarboxylate cotransporter (NaDC3) can transport Krebs cycle intermediates into cells
20813124After NaDC3 was overexpressed in two human embryo lung fibroblastic cell lines, WI38 and MRC-5, we found that the cells displayed aging-related phenotypes in advance
20813124In WI38/hNaDC3 cells treated with the activators of SIRT1, aging-related phenotypes induced by NaDC3 were obviously improved
20813124Further study found that enhanced intracellular NAD(+) level could attenuate the aging phenotypes induced by NaDC3
15983172To investigate the role of human Na(+)/dicarboxylate cotransporter 3 (hNaDC3) in the replicative senescence of normal human embryonic lung diploid fibroblasts (WI-38), a retroviral vector containing hNaDC3 was constructed
15983172Our results have, for the first time, demonstrated that high expression of hNaDC3 may be able to, at least partly, promote the cellular senescence of human diploid fibroblasts
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