HCSGD entry for ST3GAL2
1. General information
| Official gene symbol | ST3GAL2 |
|---|---|
| Entrez ID | 6483 |
| Gene full name | ST3 beta-galactoside alpha-2,3-sialyltransferase 2 |
| Other gene symbols | Gal-NAc6S SIAT4B ST3GALII ST3GalA.2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0003836 | Beta-galactoside (CMP) alpha-2,3-sialyltransferase activity | IEA | molecular_function |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006040 | Amino sugar metabolic process | TAS | biological_process |
| GO:0006464 | Cellular protein modification process | TAS | biological_process |
| GO:0016266 | O-glycan processing | TAS | biological_process |
| GO:0018146 | Keratan sulfate biosynthetic process | TAS | biological_process |
| GO:0030173 | Integral component of Golgi membrane | IEA | cellular_component |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0032580 | Golgi cisterna membrane | IEA | cellular_component |
| GO:0042339 | Keratan sulfate metabolic process | TAS | biological_process |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0097503 | Sialylation | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2443115611 | 0.8424404012 | 0.9325006671 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0474689640 |
| GSE13712_SHEAR | Down | -0.2666258450 |
| GSE13712_STATIC | Down | -0.0916722819 |
| GSE19018 | Down | -0.2342433426 |
| GSE19899_A1 | Up | 0.1412217912 |
| GSE19899_A2 | Up | 0.4445914104 |
| PubMed_21979375_A1 | Up | 0.4164525467 |
| PubMed_21979375_A2 | Up | 0.5511934753 |
| GSE35957 | Down | -0.2325519515 |
| GSE36640 | Up | 0.0016367576 |
| GSE54402 | Up | 0.3152326559 |
| GSE9593 | Up | 0.0409166127 |
| GSE43922 | Up | 0.3726758340 |
| GSE24585 | Up | 0.1547046469 |
| GSE37065 | Down | -0.2006345623 |
| GSE28863_A1 | Up | 0.0196289368 |
| GSE28863_A2 | Up | 0.0306171568 |
| GSE28863_A3 | Down | -0.1853819162 |
| GSE28863_A4 | Up | 0.0595170918 |
| GSE48662 | Up | 0.1795559369 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-760 | MIMAT0004957 | MIRT036742 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039844 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042249 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042983 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
