HCSGD entry for SMAP2
1. General information
| Official gene symbol | SMAP2 |
|---|---|
| Entrez ID | 64744 |
| Gene full name | small ArfGAP2 |
| Other gene symbols | RP1-228H13.3 SMAP1L |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0008060 | ARF GTPase activator activity | IEA | molecular_function |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0032312 | Regulation of ARF GTPase activity | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0469680635 | 0.4668955549 | 0.4802644436 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0103947281 |
| GSE13712_SHEAR | Down | -0.3302262182 |
| GSE13712_STATIC | Up | 0.2618920319 |
| GSE19018 | Down | -0.3249311697 |
| GSE19899_A1 | Up | 0.9107660238 |
| GSE19899_A2 | Up | 0.6715013995 |
| PubMed_21979375_A1 | Up | 0.7662339590 |
| PubMed_21979375_A2 | Up | 0.5059727311 |
| GSE35957 | Down | -0.3412300075 |
| GSE36640 | Down | -0.8122605177 |
| GSE54402 | Up | 0.8677041778 |
| GSE9593 | Down | -0.1984373816 |
| GSE43922 | Up | 0.4208228233 |
| GSE24585 | Up | 0.0654051893 |
| GSE37065 | Down | -0.0989159350 |
| GSE28863_A1 | Up | 0.0445129412 |
| GSE28863_A2 | Up | 0.7488070934 |
| GSE28863_A3 | Down | -0.3767965803 |
| GSE28863_A4 | Down | -0.1930041446 |
| GSE48662 | Down | -0.2153208707 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-708-5p | MIMAT0004926 | MIRT037758 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-652-3p | MIMAT0003322 | MIRT039542 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040553 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049376 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-25-3p | MIMAT0000081 | MIRT050238 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051572 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
