HCSGD entry for CSMD1
1. General information
| Official gene symbol | CSMD1 |
|---|---|
| Entrez ID | 64478 |
| Gene full name | CUB and Sushi multiple domains 1 |
| Other gene symbols | PPP1R24 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8025885339 | 0.9035158467 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0486319947 |
| GSE13712_SHEAR | Up | 0.0173098460 |
| GSE13712_STATIC | Up | 0.0139170330 |
| GSE19018 | Up | 0.1068101591 |
| GSE19899_A1 | Up | 0.0579148369 |
| GSE19899_A2 | Up | 0.0733535671 |
| PubMed_21979375_A1 | Up | 0.0808879115 |
| PubMed_21979375_A2 | Down | -0.0933473281 |
| GSE35957 | Up | 0.0494962193 |
| GSE36640 | Down | -0.0655756034 |
| GSE54402 | Up | 0.0202392990 |
| GSE9593 | Down | -0.0213031608 |
| GSE43922 | Up | 0.0890566187 |
| GSE24585 | Down | -0.1028427465 |
| GSE37065 | Down | -0.0441948138 |
| GSE28863_A1 | Down | -0.0152803784 |
| GSE28863_A2 | Up | 0.0920324258 |
| GSE28863_A3 | Up | 0.1558662126 |
| GSE28863_A4 | Up | 0.0402359510 |
| GSE48662 | Up | 0.0017242396 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 22532803 | Monozygotic twin methylation difference analyses identified one potential environmentally-mediated ap-DMR associated with total cholesterol and LDL (CSMD1) |
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