HCSGD entry for SYCE3
1. General information
| Official gene symbol | SYCE3 |
|---|---|
| Entrez ID | 644186 |
| Gene full name | synaptonemal complex central element protein 3 |
| Other gene symbols | C22orf41 THEG2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000801 | Central element | ISS | cellular_component |
| GO:0005634 | Nucleus | ISS | cellular_component |
| GO:0005694 | Chromosome | ISS | cellular_component |
| GO:0007130 | Synaptonemal complex assembly | ISS | biological_process |
| GO:0007131 | Reciprocal meiotic recombination | ISS | biological_process |
| GO:0007283 | Spermatogenesis | ISS | biological_process |
| GO:0043065 | Positive regulation of apoptotic process | IEA | biological_process |
| GO:0051301 | Cell division | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7852803997 | 0.4456403898 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1079270205 |
| GSE13712_SHEAR | Down | -0.1678917166 |
| GSE13712_STATIC | Up | 0.0670838792 |
| GSE19018 | Down | -0.1897650880 |
| GSE19899_A1 | Down | -0.0409730531 |
| GSE19899_A2 | Down | -0.0099981568 |
| PubMed_21979375_A1 | Up | 0.0941463085 |
| PubMed_21979375_A2 | Down | -0.2833963255 |
| GSE35957 | Down | -0.1413018699 |
| GSE36640 | Up | 0.1647057314 |
| GSE54402 | Down | -0.0059782942 |
| GSE9593 | Up | 0.2309727863 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.0261864498 |
| GSE28863_A2 | Up | 0.0314601447 |
| GSE28863_A3 | Down | -0.0687295814 |
| GSE28863_A4 | Up | 0.0583900614 |
| GSE48662 | Up | 0.1726880983 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
