HCSGD entry for GMCL1
1. General information
| Official gene symbol | GMCL1 |
|---|---|
| Entrez ID | 64395 |
| Gene full name | germ cell-less, spermatogenesis associated 1 |
| Other gene symbols | BTBD13 GCL GCL1 SPATA29 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005635 | Nuclear envelope | IEA | cellular_component |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007283 | Spermatogenesis | IEA | biological_process |
| GO:0016363 | Nuclear matrix | IEA | cellular_component |
| GO:0030154 | Cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1013831389 | 0.2931201170 | 0.6629827578 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3028654067 |
| GSE13712_SHEAR | Down | -0.8003845065 |
| GSE13712_STATIC | Down | -0.4062019226 |
| GSE19018 | Down | -0.1693450293 |
| GSE19899_A1 | Up | 0.2519784949 |
| GSE19899_A2 | Up | 0.4826864368 |
| PubMed_21979375_A1 | Up | 1.1971153581 |
| PubMed_21979375_A2 | Up | 1.3700321840 |
| GSE35957 | Up | 0.2199758616 |
| GSE36640 | Down | -0.3407670362 |
| GSE54402 | Up | 0.5504757682 |
| GSE9593 | Down | -0.1171831454 |
| GSE43922 | Up | 0.2206373255 |
| GSE24585 | Down | -0.4401441599 |
| GSE37065 | Down | -0.0584687256 |
| GSE28863_A1 | Up | 0.1715689619 |
| GSE28863_A2 | Up | 0.0955402893 |
| GSE28863_A3 | Up | 0.1440485644 |
| GSE28863_A4 | Up | 0.0708837247 |
| GSE48662 | Down | -0.3949515269 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022371 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
