HCSGD entry for LIN7B
1. General information
| Official gene symbol | LIN7B |
|---|---|
| Entrez ID | 64130 |
| Gene full name | lin-7 homolog B (C. elegans) |
| Other gene symbols | LIN-7B MALS-2 MALS2 VELI2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005923 | Tight junction | IEA | cellular_component |
| GO:0006887 | Exocytosis | IEA | biological_process |
| GO:0007269 | Neurotransmitter secretion | IEA | biological_process |
| GO:0014069 | Postsynaptic density | IEA | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016323 | Basolateral plasma membrane | IEA | cellular_component |
| GO:0019904 | Protein domain specific binding | IPI | molecular_function |
| GO:0043005 | Neuron projection | IEA | cellular_component |
| GO:0045211 | Postsynaptic membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0327702937 | 0.9653441169 | 0.4176982567 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3317458910 |
| GSE13712_SHEAR | Down | -0.0035247005 |
| GSE13712_STATIC | Up | 0.0987532226 |
| GSE19018 | Up | 0.1043676403 |
| GSE19899_A1 | Down | -0.1148318684 |
| GSE19899_A2 | Up | 0.6355836133 |
| PubMed_21979375_A1 | Up | 0.8559892170 |
| PubMed_21979375_A2 | Up | 0.8825762667 |
| GSE35957 | Up | 0.0130641229 |
| GSE36640 | Up | 1.3519179372 |
| GSE54402 | Up | 0.3306019632 |
| GSE9593 | Down | -0.0205685590 |
| GSE43922 | Up | 0.0842246107 |
| GSE24585 | Up | 0.1321570604 |
| GSE37065 | Down | -0.0626408234 |
| GSE28863_A1 | Down | -0.1192556142 |
| GSE28863_A2 | Down | -0.2028405207 |
| GSE28863_A3 | Up | 0.4611068174 |
| GSE28863_A4 | Up | 0.1347657314 |
| GSE48662 | Up | 0.2510651343 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-106b-5p | MIMAT0000680 | MIRT020458 | Microarray | Functional MTI (Weak) | 17242205 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
