HCSGD entry for CLSTN2
1. General information
| Official gene symbol | CLSTN2 |
|---|---|
| Entrez ID | 64084 |
| Gene full name | calsyntenin 2 |
| Other gene symbols | ALC-GAMMA CDHR13 CS2 CSTN2 alcagamma |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0045211 | Postsynaptic membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1497236351 | 0.9138699328 | 0.7740416536 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0476338875 |
| GSE13712_SHEAR | Down | -0.2679567592 |
| GSE13712_STATIC | Down | -0.1242698021 |
| GSE19018 | Up | 0.1614824931 |
| GSE19899_A1 | Up | 0.1489449702 |
| GSE19899_A2 | Up | 0.0826193638 |
| PubMed_21979375_A1 | Up | 0.2923813336 |
| PubMed_21979375_A2 | Up | 0.0624931490 |
| GSE35957 | Down | -0.0725723937 |
| GSE36640 | Up | 1.1532131779 |
| GSE54402 | Up | 0.3960690116 |
| GSE9593 | Up | 0.0757421315 |
| GSE43922 | Up | 0.1191705840 |
| GSE24585 | Down | -0.1830979830 |
| GSE37065 | Down | -0.0700351120 |
| GSE28863_A1 | Down | -0.1177892676 |
| GSE28863_A2 | Up | 0.5590494610 |
| GSE28863_A3 | Up | 0.0804728542 |
| GSE28863_A4 | Down | -0.0020859869 |
| GSE48662 | Up | 0.1678182697 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029777 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
