HCSGD entry for CDH23

1. General information

Official gene symbolCDH23
Entrez ID64072
Gene full namecadherin-related 23
Other gene symbolsCDHR23 USH1D
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0006816Calcium ion transportIMPbiological_process
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0007601Visual perceptionIEAbiological_process
GO:0007605Sensory perception of soundIMPbiological_process
GO:0016020MembraneNAScellular_component
GO:0016021Integral component of membraneIEAcellular_component
GO:0016339Calcium-dependent cell-cell adhesionNASbiological_process
GO:0032420StereociliumISScellular_component
GO:0045494Photoreceptor cell maintenanceIMPbiological_process
GO:0050896Response to stimulusIEAbiological_process
GO:0050953Sensory perception of light stimulusIMPbiological_process
GO:0050957EquilibrioceptionIMPbiological_process
GO:0051480Cytosolic calcium ion homeostasisIMPbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.70642921620.93412479770.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0140580251
GSE13712_SHEARDown-0.0395365050
GSE13712_STATICUp0.0235795331
GSE19018Up0.0974380131
GSE19899_A1Up0.0562995408
GSE19899_A2Up0.0976381528
PubMed_21979375_A1Up0.0394868034
PubMed_21979375_A2Down-0.0449923100
GSE35957Up0.0906711672
GSE36640Up0.0409413029
GSE54402Up0.0220784531
GSE9593Up0.0761407379
GSE43922Up0.0523154780
GSE24585Down-0.0552266805
GSE37065Up0.0673270032
GSE28863_A1Down-0.0601385147
GSE28863_A2Down-0.0153120716
GSE28863_A3Up0.2143536800
GSE28863_A4Up0.1165195180
GSE48662Up0.0272687882

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.