HCSGD entry for PCIF1
1. General information
| Official gene symbol | PCIF1 |
|---|---|
| Entrez ID | 63935 |
| Gene full name | PDX1 C-terminal inhibiting factor 1 |
| Other gene symbols | C20orf67 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005825 | Half bridge of spindle pole body | IDA | cellular_component |
| GO:0010923 | Negative regulation of phosphatase activity | IDA | biological_process |
| GO:0015629 | Actin cytoskeleton | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5422078492 | 0.1588757114 | 0.9999902473 | 0.7700200920 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1452702650 |
| GSE13712_SHEAR | Down | -0.3206270695 |
| GSE13712_STATIC | Up | 0.0380353302 |
| GSE19018 | Down | -0.0307553993 |
| GSE19899_A1 | Down | -0.0862573524 |
| GSE19899_A2 | Up | 0.3298420418 |
| PubMed_21979375_A1 | Down | -0.0920557405 |
| PubMed_21979375_A2 | Up | 0.3265876553 |
| GSE35957 | Down | -0.4485818698 |
| GSE36640 | Down | -0.5391491323 |
| GSE54402 | Up | 0.0837847571 |
| GSE9593 | Down | -0.5098249572 |
| GSE43922 | Down | -0.5528655527 |
| GSE24585 | Up | 0.2902414074 |
| GSE37065 | Down | -0.0578794957 |
| GSE28863_A1 | Up | 0.2016992424 |
| GSE28863_A2 | Down | -0.1497936043 |
| GSE28863_A3 | Down | -0.1068574964 |
| GSE28863_A4 | Down | -0.1535064135 |
| GSE48662 | Up | 1.1775825654 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7a-5p | MIMAT0000062 | MIRT052546 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
