HCSGD entry for GALNT11
1. General information
| Official gene symbol | GALNT11 |
|---|---|
| Entrez ID | 63917 |
| Gene full name | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) |
| Other gene symbols | GALNACT11 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0004653 | Polypeptide N-acetylgalactosaminyltransferase activity | IDA | molecular_function |
| GO:0005112 | Notch binding | IDA | molecular_function |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0007220 | Notch receptor processing | ISS | biological_process |
| GO:0007368 | Determination of left/right symmetry | ISS | biological_process |
| GO:0008593 | Regulation of Notch signaling pathway | ISS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016266 | O-glycan processing | TAS | biological_process |
| GO:0016740 | Transferase activity | IEA | molecular_function |
| GO:0016757 | Transferase activity, transferring glycosyl groups | IEA | molecular_function |
| GO:0018243 | Protein O-linked glycosylation via threonine | IDA | biological_process |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0060271 | Cilium morphogenesis | ISS | biological_process |
| GO:0061314 | Notch signaling involved in heart development | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3592666654 | 0.1876829718 | 0.9999902473 | 0.8399991672 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2181207987 |
| GSE13712_SHEAR | Down | -0.6280197540 |
| GSE13712_STATIC | Down | -0.1120754906 |
| GSE19018 | Up | 0.1263399530 |
| GSE19899_A1 | Down | -0.3887292083 |
| GSE19899_A2 | Up | 0.0865541828 |
| PubMed_21979375_A1 | Down | -0.7941141528 |
| PubMed_21979375_A2 | Up | 0.4039709617 |
| GSE35957 | Up | 0.1703460696 |
| GSE36640 | Up | 1.0945523445 |
| GSE54402 | Down | -0.4939357307 |
| GSE9593 | Up | 0.4456010562 |
| GSE43922 | Down | -0.2635630485 |
| GSE24585 | Up | 0.3394359704 |
| GSE37065 | Down | -0.0464183904 |
| GSE28863_A1 | Up | 0.0926366245 |
| GSE28863_A2 | Up | 0.3440318707 |
| GSE28863_A3 | Down | -0.6077080710 |
| GSE28863_A4 | Down | -0.1661270930 |
| GSE48662 | Up | 0.0337939498 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029838 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-27b-3p | MIMAT0000419 | MIRT046225 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052104 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
