HCSGD entry for GPATCH3
1. General information
| Official gene symbol | GPATCH3 |
|---|---|
| Entrez ID | 63906 |
| Gene full name | G patch domain containing 3 |
| Other gene symbols | GPATC3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0008150 | Biological_process | ND | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0833762889 | 0.9724502792 | 0.6085821686 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1421007592 |
| GSE13712_SHEAR | Up | 0.0158459759 |
| GSE13712_STATIC | Up | 0.3053309938 |
| GSE19018 | Up | 0.0435567843 |
| GSE19899_A1 | Up | 0.1076436169 |
| GSE19899_A2 | Up | 0.4813502479 |
| PubMed_21979375_A1 | Up | 0.5580491158 |
| PubMed_21979375_A2 | Up | 0.8309305775 |
| GSE35957 | Down | -0.2716209126 |
| GSE36640 | Down | -0.1239278254 |
| GSE54402 | Up | 0.0930632133 |
| GSE9593 | Up | 0.2329314520 |
| GSE43922 | Up | 0.0468890754 |
| GSE24585 | Down | -0.0780447577 |
| GSE37065 | Up | 0.1257228940 |
| GSE28863_A1 | Up | 0.1587902906 |
| GSE28863_A2 | Up | 0.3802482799 |
| GSE28863_A3 | Up | 0.0297903215 |
| GSE28863_A4 | Up | 0.0100077741 |
| GSE48662 | Up | 0.2533957460 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-339-5p | MIMAT0000764 | MIRT042787 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
