HCSGD entry for BCAN

1. General information

Official gene symbolBCAN
Entrez ID63827
Gene full namebrevican
Other gene symbolsBEHAB CSPG7
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005540Hyaluronic acid bindingIEAmolecular_function
GO:0005576Extracellular regionTAScellular_component
GO:0005578Proteinaceous extracellular matrixIEAcellular_component
GO:0005796Golgi lumenTAScellular_component
GO:0005975Carbohydrate metabolic processTASbiological_process
GO:0007155Cell adhesionIEAbiological_process
GO:0021766Hippocampus developmentIEAbiological_process
GO:0030198Extracellular matrix organizationTASbiological_process
GO:0030203Glycosaminoglycan metabolic processTASbiological_process
GO:0030204Chondroitin sulfate metabolic processTASbiological_process
GO:0030206Chondroitin sulfate biosynthetic processTASbiological_process
GO:0030207Chondroitin sulfate catabolic processTASbiological_process
GO:0030208Dermatan sulfate biosynthetic processTASbiological_process
GO:0030246Carbohydrate bindingIEAmolecular_function
GO:0031225Anchored component of membraneIEAcellular_component
GO:0043202Lysosomal lumenTAScellular_component
GO:0044281Small molecule metabolic processTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.67881320240.88534273390.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0067862038
GSE13712_SHEARUp0.1887858830
GSE13712_STATICUp0.0395611989
GSE19018Up0.0485586518
GSE19899_A1Up0.0601609958
GSE19899_A2Up0.2390288768
PubMed_21979375_A1Down-0.0302759133
PubMed_21979375_A2Up0.0976710827
GSE35957Up0.1240007447
GSE36640Up0.0256036985
GSE54402Up0.0594192079
GSE9593Up0.0082000271
GSE43922Up0.0290367993
GSE24585Down-0.0464108161
GSE37065Down-0.1776110044
GSE28863_A1Down-0.1967654176
GSE28863_A2Up0.0120780845
GSE28863_A3Up0.2420824502
GSE28863_A4Up0.0578187063
GSE48662Down-0.0478499967

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-133a-3pMIMAT0000427MIRT021697MicroarrayFunctional MTI (Weak)21396852
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.