HCSGD entry for BGN

1. General information

Official gene symbolBGN
Entrez ID633
Gene full namebiglycan
Other gene symbolsDSPG1 PG-S1 PGI SLRR1A
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001974Blood vessel remodelingIEAbiological_process
GO:0005201Extracellular matrix structural constituentNASmolecular_function
GO:0005539Glycosaminoglycan bindingIEAmolecular_function
GO:0005576Extracellular regionTAScellular_component
GO:0005578Proteinaceous extracellular matrixNAScellular_component
GO:0005622IntracellularIEAcellular_component
GO:0005796Golgi lumenTAScellular_component
GO:0005975Carbohydrate metabolic processTASbiological_process
GO:0008150Biological_processNDbiological_process
GO:0009986Cell surfaceIDAcellular_component
GO:0019800Peptide cross-linking via chondroitin 4-sulfate glycosaminoglycanIEAbiological_process
GO:0030133Transport vesicleIDAcellular_component
GO:0030198Extracellular matrix organizationTASbiological_process
GO:0030203Glycosaminoglycan metabolic processTASbiological_process
GO:0030204Chondroitin sulfate metabolic processTASbiological_process
GO:0030206Chondroitin sulfate biosynthetic processTASbiological_process
GO:0030207Chondroitin sulfate catabolic processTASbiological_process
GO:0030208Dermatan sulfate biosynthetic processTASbiological_process
GO:0031012Extracellular matrixIDA IEA ISScellular_component
GO:0042383SarcolemmaIEAcellular_component
GO:0043202Lysosomal lumenTAScellular_component
GO:0044281Small molecule metabolic processTASbiological_process
GO:0050840Extracellular matrix bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.30124913190.00149239770.99969783480.0751078394

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-1.7304129098
GSE13712_SHEARDown-4.0685745497
GSE13712_STATICDown-3.5592074651
GSE19018Up0.1564326267
GSE19899_A1Up0.0949773020
GSE19899_A2Up0.0883552277
PubMed_21979375_A1Down-0.0425238065
PubMed_21979375_A2Down-1.5523594515
GSE35957Down-0.2185087835
GSE36640Down-3.4708586786
GSE54402Up0.8698992313
GSE9593Down-0.4141966594
GSE43922Down-0.1376853646
GSE24585Up0.1639880632
GSE37065Down-0.8387207954
GSE28863_A1Up0.3807056650
GSE28863_A2Down-0.1755843964
GSE28863_A3Up0.4968398898
GSE28863_A4Down-0.1476524914
GSE48662Up0.7133505522

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.