HCSGD entry for SCML1
1. General information
| Official gene symbol | SCML1 |
|---|---|
| Entrez ID | 6322 |
| Gene full name | sex comb on midleg-like 1 (Drosophila) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | TAS | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | TAS | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0009653 | Anatomical structure morphogenesis | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1166194673 | 0.0713714411 | 0.7001690237 | 0.5040902871 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4011578778 |
| GSE13712_SHEAR | Down | -0.3536961687 |
| GSE13712_STATIC | Up | 0.0968633533 |
| GSE19018 | Down | -0.7783764035 |
| GSE19899_A1 | Down | -0.4083811416 |
| GSE19899_A2 | Down | -0.0369220561 |
| PubMed_21979375_A1 | Up | 0.7577395816 |
| PubMed_21979375_A2 | Up | 0.6188893615 |
| GSE35957 | Down | -0.7065874570 |
| GSE36640 | Down | -0.2429855314 |
| GSE54402 | Up | 0.3403271447 |
| GSE9593 | Up | 0.1015250369 |
| GSE43922 | Up | 0.2453854805 |
| GSE24585 | Down | -1.2745755160 |
| GSE37065 | Up | 0.2828946984 |
| GSE28863_A1 | Up | 0.3625179857 |
| GSE28863_A2 | Up | 0.6961131348 |
| GSE28863_A3 | Down | -0.5917343382 |
| GSE28863_A4 | Up | 0.3259662403 |
| GSE48662 | Down | -0.5982464394 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-24-3p | MIMAT0000080 | MIRT030379 | Microarray | Functional MTI (Weak) | 19748357 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
