HCSGD entry for RPS17

1. General information

Official gene symbolRPS17
Entrez ID6218
Gene full nameribosomal protein S17
Other gene symbolsDBA4 RPS17L RPS17L1 RPS17L2 S17
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000028Ribosomal small subunit assemblyIBAbiological_process
GO:0000184Nuclear-transcribed mRNA catabolic process, nonsense-mediated decayTASbiological_process
GO:0003735Structural constituent of ribosomeIEA NASmolecular_function
GO:0005829CytosolTAScellular_component
GO:0005840RibosomeIEA NAScellular_component
GO:0006364RRNA processingIMPbiological_process
GO:0006412TranslationIC IEA TASbiological_process
GO:0006413Translational initiationNAS TASbiological_process
GO:0006414Translational elongationIBA TASbiological_process
GO:0006415Translational terminationTASbiological_process
GO:0006614SRP-dependent cotranslational protein targeting to membraneTASbiological_process
GO:0010467Gene expressionTASbiological_process
GO:0016032Viral processTASbiological_process
GO:0016070RNA metabolic processTASbiological_process
GO:0016071MRNA metabolic processTASbiological_process
GO:0019058Viral life cycleTASbiological_process
GO:0019083Viral transcriptionTASbiological_process
GO:0022627Cytosolic small ribosomal subunitIBA IDAcellular_component
GO:0034101Erythrocyte homeostasisIMPbiological_process
GO:0042274Ribosomal small subunit biogenesisIMPbiological_process
GO:0044267Cellular protein metabolic processTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.98886985680.12185930250.99999024730.6700586358

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0091843373
GSE13712_SHEARDown-0.3229385818
GSE13712_STATICDown-0.1981185350
GSE19018Up0.1347114526
GSE19899_A1Down-0.0680464233
GSE19899_A2Down-0.1387076037
PubMed_21979375_A1Down-0.0712828676
PubMed_21979375_A2Down-0.0103686450
GSE35957Down-0.2361797993
GSE36640Down-0.2148373085
GSE54402Up0.1088968325
GSE9593Down-0.0417435526
GSE43922Down-0.1879791467
GSE24585Down-0.0647667122
GSE37065Down-0.4176160296
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Down-0.3193468891

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-615-3pMIMAT0003283MIRT039783CLASHFunctional MTI (Weak)23622248
hsa-miR-320aMIMAT0000510MIRT044696CLASHFunctional MTI (Weak)23622248
hsa-miR-222-3pMIMAT0000279MIRT046624CLASHFunctional MTI (Weak)23622248
hsa-miR-30d-5pMIMAT0000245MIRT047810CLASHFunctional MTI (Weak)23622248
hsa-miR-148a-3pMIMAT0000243MIRT048036CLASHFunctional MTI (Weak)23622248
hsa-miR-30a-5pMIMAT0000087MIRT049945CLASHFunctional MTI (Weak)23622248
hsa-miR-16-5pMIMAT0000069MIRT051166CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.